BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H06LP1|AL426112
(609 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1128 0.0
>3x_Contig1802
Length = 45229
Score = 1128 bits (561), Expect = 0.0
Identities = 591/607 (97%), Gaps = 1/607 (0%)
Strand = Plus / Minus
Query: 3 atgtgtagatttcttagctataaaggtagaaagcgatagatatatcctacatctattata 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4738 atgtgtagatttcttagctataaaggtagaaagcgatagatatatcctacatctattata 4679
Query: 63 gaaaatwagtgccattggttgtagagagccagacaaatttatgagcatagttatgtatca 122
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4678 gaaaataagtgccattggttgtagagagccagacaaatttatgagcatagttatgtatca 4619
Query: 123 tataaaawwagtttatwagtgtctcaaagtaaggttttgaatttgtttataatttatcat 182
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4618 tataaaaaaagtttataagtgtctcaaagtaaggttttgaatttgtttataatttatcat 4559
Query: 183 ttgawttcttgactgtttgtatgcgttacatagtttcacgcccaaactgcaaggttcgga 242
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4558 ttgaattcttgactgtttgtatgcgtaacatagtttcacgcccaaactgcaaggttcgga 4499
Query: 243 ttcgtttcatgaatccggatttttgatcactaattgctggtaacacgaactggaaaaatt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4498 ttcgtttcatgaatccggatttttgatcactaattgctggtaacacgaactggaaaaatt 4439
Query: 303 gaatagttttgaagatacagatagccggtacaaacaggaaacctgtttgatagtgattcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4438 gaatagttttgaagatacagatagccggtacaaacaggaaacctgtttgatagtgattcc 4379
Query: 363 ttttatctattatcaggccggacgaatctagattaatagagatcccaacacacaggctgc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4378 ttttatctattatcaggccggacgaatctagattaatagagatcccaacacacaggctgc 4319
Query: 423 ygcmaacaaaccagaagatgaagcmagtygcttgacaccagctccagcgtaagtbcttag 482
|| |||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 4318 tgcaaacaaaccagaagatgaagcaagttgcttgacaccagctccagcgtaagtacttag 4259
Query: 483 agcctgagtggatgaagcagctgtygtgacagccacaggagtggtttcgactgcgcgaag 542
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 4258 agcctgagtggatgaagcagctgttgtgacagcaacaggagtggtttcgactgcg-gaag 4200
Query: 543 tgacaacagcaggagtggtttcggtagcaggagtggtttcagcagcagcmggagttgttt 602
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 4199 tgacaacagcaggagtggtttcggtagcaggagtggtttcagcagcagcaggagtagttt 4140
Query: 603 cgacagc 609
|||||||
Sbjct: 4139 cgacagc 4133
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3733
Number of Sequences: 1807
Number of extensions: 3733
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 609
length of database: 10,358,551
effective HSP length: 16
effective length of query: 593
effective length of database: 10,329,639
effective search space: 6125475927
effective search space used: 6125475927
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (99.0 bits)